Magnetic Resonance Imaging (MRI)

An introduction to normalization and calibration methods in functional MRI

In functional magnetic resonance imaging (fMRI), the blood oxygenation level dependent (BOLD) signal is often interpreted as a measure of neural activity. However, because the BOLD signal reflects the complex interplay of neural, vascular, and metabolic processes, such an interpretation is not always valid. There is growing evidence that changes in the baseline neurovascular state can result in significant modulations of the BOLD signal that are independent of changes in neural activity.

Publication Type: 
Journal Articles
Journal: 
Psychometrika

Validation of fast diffusion kurtosis MRI for imaging acute ischemia in a rodent model of stroke

Diffusion-weighted imaging (DWI) captures ischemic tissue that is likely to infarct, and has become one of the most widely used acute stroke imaging techniques. Diffusion kurtosis imaging (DKI) has lately been postulated as a complementary MRI method to stratify the heterogeneously damaged DWI lesion. However, the conventional DKI acquisition time is relatively long, limiting its use in the acute stroke setting. Recently, a fast kurtosis mapping method has been demonstrated in fixed brains and control subjects.

Publication Type: 
Journal Articles
Journal: 
NMR Biomed

Using action understanding to understand the left inferior parietal cortex in the human brain

Humans have a sophisticated knowledge of the actions that can be performed with objects. In an fMRI study we tried to establish whether this depends on areas that are homologous with the inferior parietal cortex (area PFG) in macaque monkeys. Cells have been described in area PFG that discharge differentially depending upon whether the observer sees an object being brought to the mouth or put in a container.

Publication Type: 
Journal Articles
Journal: 
Brain Res

Multi-shell diffusion signal recovery from sparse measurements

For accurate estimation of the ensemble average diffusion propagator (EAP), traditional multi-shell diffusion imaging (MSDI) approaches require acquisition of diffusion signals for a range of b-values. However, this makes the acquisition time too long for several types of patients, making it difficult to use in a clinical setting. In this work, we propose a new method for the reconstruction of diffusion signals in the entire q-space from highly undersampled sets of MSDI data, thus reducing the scan time significantly.

Publication Type: 
Journal Articles
Journal: 
Med Image Anal

Sex differences in the persistence of the amygdala response to negative material

Previous studies have indicated that men and women have different amygdala responses to novel (vs familiar) and valenced (positive vs negative) material. It is not known, however, whether these affective sex differences are related. In this study, we tested whether women have more persistent amygdala responses to familiar, negative material than men do. During fMRI, male and female participants viewed evocative images that varied in novelty and valence.

Publication Type: 
Journal Articles
Journal: 
Soc Cogn Affect Neurosci

Validation of the hypercapnic calibrated fMRI method using DOT-fMRI fusion imaging

Calibrated functional magnetic resonance imaging (fMRI) is a widely used method to investigate brain function in terms of physiological quantities such as the cerebral metabolic rate of oxygen (CMRO2). The first and one of the most common methods of fMRI calibration is hypercapnic calibration. This is achieved via simultaneous measures of the blood-oxygenation-level dependent (BOLD) and the arterial spin labeling (ASL) signals during a functional task that evokes regional changes in CMRO2.

Publication Type: 
Journal Articles
Journal: 
Neuroimage

Phenotype matters: the absence of a positive association between cortical thinning and chronic low back pain when controlling for salient clinical variables

AIMS/OBJECTIVES/BACKGROUND: Studies have associated chronic low back pain (cLBP) with grey matter thinning. But these studies have not controlled for important clinical variables (such as a comorbid affective disorder, pain medication, age, or pain phenotype), which may reduce or eliminate these associations.

Publication Type: 
Journal Articles
Journal: 
Clin J Pain

Advanced magnetic resonance imaging of the physical processes in human glioblastoma

The most common malignant primary brain tumor, glioblastoma multiforme (GBM) is a devastating disease with a grim prognosis. Patient survival is typically less than two years and fewer than 10% of patients survive more than five years. Magnetic resonance imaging (MRI) can have great utility in the diagnosis, grading, and management of patients with GBM as many of the physical manifestations of the pathologic processes in GBM can be visualized and quantified using MRI.

Publication Type: 
Journal Articles
Journal: 
Cancer Res

Reconfigurable task-dependent functional coupling modes cluster around a core functional architecture

Functional coupling across distributed brain regions varies across task contexts, yet there are stable features. To better understand the range and central tendencies of network configurations, coupling patterns were explored using functional MRI (fMRI) across 14 distinct continuously performed task states ranging from passive fixation to increasingly demanding classification tasks. Mean global correlation profiles across the cortex ranged from 0.69 to 0.82 between task states.

Publication Type: 
Journal Articles
Journal: 
Philos Trans R Soc Lond B Biol Sci

Resting state connectivity immediately following learning correlates with subsequent sleep-dependent enhancement of motor task performance

There is ongoing debate concerning the functions of resting-state brain activity. Prior work demonstrates that memory encoding enhances subsequent resting-state functional connectivity within task-relevant networks and that these changes predict better recognition. Here, we used functional connectivity MRI (fcMRI) to examine whether task-induced changes in resting-state connectivity correlate with performance improvement after sleep. In two separate sessions, resting-state scans were acquired before and after participants performed a motor task.

Publication Type: 
Journal Articles
Journal: 
Neuroimage

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