Magnetic Resonance Imaging (MRI)

Object-processing neural efficiency differentiates object from spatial visualizers

The visual system processes object properties and spatial properties in distinct subsystems, and we hypothesized that this distinction might extend to individual differences in visual processing. We conducted a functional MRI study investigating the neural underpinnings of individual differences in object versus spatial visual processing. Nine participants of high object-processing ability ('object' visualizers) and eight participants of high spatial-processing ability ('spatial' visualizers) were scanned, while they performed an object-processing task.

Publication Type: 
Journal Articles
Journal: 
Neuroreport

A new metric for detecting change in slowly evolving brain tumors: validation in meningioma patients

BACKGROUND: Change detection is a critical component in the diagnosis and monitoring of many slowly evolving pathologies.
OBJECTIVE: This article describes a semiautomatic monitoring approach using longitudinal medical images. We test the method on brain scans of patients with meningioma, which experts have found difficult to monitor because the tumor evolution is very slow and may be obscured by artifacts related to image acquisition.

Publication Type: 
Journal Articles
Journal: 
Neurosurgery

Extrapolating glioma invasion margin in brain magnetic resonance images: suggesting new irradiation margins

Radiotherapy for brain glioma treatment relies on magnetic resonance (MR) and computed tomography (CT) images. These images provide information on the spatial extent of the tumor, but can only visualize parts of the tumor where cancerous cells are dense enough, masking the low density infiltration. In radiotherapy, a 2 m constant margin around the tumor is taken to account for this uncertainty. This approach however, does not consider the growth dynamics of gliomas, particularly the differential motility of tumor cells in the white and in the gray matter.

Publication Type: 
Journal Articles
Journal: 
Med Image Anal

A generative approach for image-based modeling of tumor growth

Extensive imaging is routinely used in brain tumor patients to monitor the state of the disease and to evaluate therapeutic options. A large number of multi-modal and multi-temporal image volumes is acquired in standard clinical cases, requiring new approaches for comprehensive integration of information from different image sources and different time points. In this work we propose a joint generative model of tumor growth and of image observation that naturally handles multimodal and longitudinal data. We use the model for analyzing imaging data in patients with glioma.

Publication Type: 
Journal Articles
Journal: 
Inf Process Med Imaging

Computational modeling of the WHO grade II glioma dynamics: principles and applications to management paradigm

The advent of magnetic resonance imaging (MRI) has allowed the follow-up of tumor growth by precise volumetric measurements. Such information about tumor dynamics is, however, usually not fully integrated in the therapeutic management, and the assessment of tumor evolution is still limited to qualitative description. In parallel, computational models have been developed to simulate in silico tumor growth and treatment efficacy. Nevertheless, direct clinical interest of these models remains questionable, and there is a gap between scientific advances and clinical practice.

Publication Type: 
Journal Articles
Journal: 
Neurosurg Rev

Biocomputing: numerical simulation of glioblastoma growth and comparison with conventional irradiation margins

OBJECT: Estimation of glioblastoma (GBM) growth patterns is of tremendous value in determining tumour margins for radiotherapy. We have previously developed a numerical simulation model for the pattern of spread of glioblastoma tumours. This model involved the creation of a digital atlas of the brain with elasticity and resistance-to-invasion values for specific brain structures and also included probable direction of tumour spread as estimated by Diffusion Tensor Imaging (DTI).

Publication Type: 
Journal Articles
Journal: 
Phys Med

Image guided personalization of reaction-diffusion type tumor growth models using modified anisotropic eikonal equations

Reaction-diffusion based tumor growth models have been widely used in the literature for modeling the growth of brain gliomas. Lately, recent models have started integrating medical images in their formulation. Including different tissue types, geometry of the brain and the directions of white matter fiber tracts improved the spatial accuracy of reaction-diffusion models. The adaptation of the general model to the specific patient cases on the other hand has not been studied thoroughly yet. In this paper, we address this adaptation.

Publication Type: 
Journal Articles
Journal: 
IEEE Trans Med Imaging

Spatial decision forests for MS lesion segmentation in multi-channel magnetic resonance images

A new algorithm is presented for the automatic segmentation of Multiple Sclerosis (MS) lesions in 3D Magnetic Resonance (MR) images. It builds on a discriminative random decision forest framework to provide a voxel-wise probabilistic classification of the volume. The method uses multi-channel MR intensities (T1, T2, and FLAIR), knowledge on tissue classes and long-range spatial context to discriminate lesions from background. A symmetry feature is introduced accounting for the fact that some MS lesions tend to develop in an asymmetric way.

Publication Type: 
Journal Articles
Journal: 
Neuroimage

Temporal shape analysis via the spectral signature

In this paper, we adapt spectral signatures for capturing morphological changes over time. Advanced techniques for capturing temporal shape changes frequently rely on first registering the sequence of shapes and then analyzing the corresponding set of high dimensional deformation maps. Instead, we propose a simple encoding motivated by the observation that small shape deformations lead to minor refinements in the spectral signature composed of the eigenvalues of the Laplace operator.

Publication Type: 
Journal Articles
Journal: 
Med Image Comput Comput Assist Interv

Spatial decision forests for MS lesion segmentation in multi-channel MR images

A new algorithm is presented for the automatic segmentation of Multiple Sclerosis (MS) lesions in 3D MR images. It builds on the discriminative random decision forest framework to provide a voxel-wise probabilistic classification of the volume. Our method uses multi-channel MIR intensities (T1, T2, Flair), spatial prior and long-range comparisons with 3D regions to discriminate lesions. A symmetry feature is introduced accounting for the fact that some MS lesions tend to develop in an asymmetric way.

Publication Type: 
Journal Articles
Journal: 
Med Image Comput Comput Assist Interv

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