mne.bem.make_flash_bem¶

mne.bem.make_flash_bem(subject, overwrite=False, show=True, subjects_dir=None, flash_path=None, verbose=None)[source]¶

Create 3-Layer BEM model from prepared flash MRI images.

Parameters:

subject : str Subject name. overwrite : bool Write over existing .surf files in bem folder. show : bool Show surfaces to visually inspect all three BEM surfaces (recommended). subjects_dir : string, or None Path to SUBJECTS_DIR if it is not set in the environment. flash_path : str | None Path to the flash images. If None (default), mri/flash/parameter_maps within the subject reconstruction is used. New in version 0.13.0. verbose : bool, str, int, or None If not None, override default verbose level (see mne.verbose() and Logging documentation for more).

See also

convert_flash_mris

Notes

This program assumes that FreeSurfer is installed and sourced properly.

This function extracts the BEM surfaces (outer skull, inner skull, and outer skin) from multiecho FLASH MRI data with spin angles of 5 and 30 degrees, in mgz format.